Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | E1J03_04660 | Not Available | Negative | 1083692 - 1085254 | 58161.9 |
| homoserine o-succinyltransferase | E1J03_04665 | Not Available | Positive | 1085636 - 1086553 | 35688.8 |
| u32 family peptidase | E1J03_04670 | Not Available | Positive | 1086550 - 1088379 | 69926.0 |
| hypothetical protein | E1J03_04675 | Not Available | Positive | 1088366 - 1089328 | 36819.0 |
| tonb-dependent receptor | E1J03_04680 | Not Available | Negative | 1089564 - 1091987 | 92022.9 |
| luxr family transcriptional regulator | E1J03_04685 | Not Available | Negative | 1092157 - 1092777 | 23409.6 |
| dihydrolipoyl dehydrogenase | E1J03_04690 | Not Available | Positive | 1092885 - 1094234 | 48289.8 |
| lipoate--protein ligase family protein | E1J03_04695 | Not Available | Positive | 1094234 - 1094986 | 28865.8 |
| 2-oxo acid dehydrogenase subunit e2 | E1J03_04700 | Not Available | Positive | 1095054 - 1096403 | 49100.9 |
| 2-oxoisovalerate dehydrogenase | E1J03_04705 | Not Available | Positive | 1096432 - 1098465 | 75451.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

