Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | E1J03_04605 | Not Available | Positive | 1063561 - 1064577 | 39972.3 |
| susc/raga family tonb-linked outer membrane protein | E1J03_04610 | Not Available | Positive | 1064807 - 1068013 | 119134.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_04615 | Not Available | Positive | 1068019 - 1069647 | 61936.0 |
| hypothetical protein | E1J03_04620 | Not Available | Positive | 1069691 - 1072126 | 94118.2 |
| abc transporter atp-binding protein | E1J03_04630 | Not Available | Positive | 1073086 - 1075029 | 73580.2 |
| m13 family peptidase | E1J03_04635 | Not Available | Positive | 1075077 - 1077089 | 74973.9 |
| hypothetical protein | E1J03_04640 | Not Available | Positive | 1077118 - 1077618 | 18957.1 |
| efflux rnd transporter periplasmic adaptor subunit | E1J03_04645 | Not Available | Positive | 1077714 - 1078949 | 45019.8 |
| cusa/czca family heavy metal efflux rnd transporter | E1J03_04650 | Not Available | Positive | 1078962 - 1082045 | 112457.0 |
| tolc family protein | E1J03_04655 | Not Available | Positive | 1082055 - 1083224 | 43932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

