Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | E1J03_04555 | Not Available | Positive | 1048044 - 1050056 | 76530.1 |
| dna alkylation repair protein | E1J03_04560 | Not Available | Positive | 1050065 - 1050733 | 25616.1 |
| transcriptional repressor | E1J03_04565 | Not Available | Positive | 1050764 - 1051255 | 19166.0 |
| adenylosuccinate synthase | E1J03_04570 | Not Available | Positive | 1051272 - 1052543 | 46838.8 |
| duf4373 domain-containing protein | E1J03_04575 | Not Available | Positive | 1052843 - 1053646 | 30704.8 |
| susc/raga family tonb-linked outer membrane protein | E1J03_04580 | Not Available | Positive | 1054350 - 1057571 | 118912.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J03_04585 | Not Available | Positive | 1057593 - 1059101 | 56873.3 |
| sgnh/gdsl hydrolase family protein | E1J03_04590 | Not Available | Positive | 1059702 - 1060553 | 32455.8 |
| carbohydrate esterase | E1J03_04595 | Not Available | Positive | 1060831 - 1062723 | 71298.6 |
| rna polymerase sigma-70 factor | E1J03_04600 | Not Available | Positive | 1062899 - 1063489 | 23200.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

