Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | E1J03_04505 | Not Available | Positive | 1036227 - 1037723 | 54450.0 |
| 3-isopropylmalate dehydratase large subunit | E1J03_04510 | Not Available | Positive | 1037735 - 1039117 | 50113.1 |
| 3-isopropylmalate dehydratase small subunit | E1J03_04515 | Not Available | Positive | 1039131 - 1039727 | 22389.5 |
| 2-isopropylmalate synthase | E1J03_04520 | Not Available | Positive | 1039733 - 1041241 | 56454.8 |
| 3-isopropylmalate dehydrogenase | E1J03_04525 | Not Available | Positive | 1041345 - 1042406 | 39132.0 |
| ahpc/tsa family protein | E1J03_04530 | Not Available | Positive | 1042538 - 1043683 | 42873.5 |
| peptide-methionine (s)-s-oxide reductase | E1J03_04535 | Not Available | Negative | 1043752 - 1044237 | 18621.1 |
| tetratricopeptide repeat protein | E1J03_04540 | Not Available | Positive | 1044355 - 1045209 | 32635.6 |
| dna helicase recq | E1J03_04545 | Not Available | Negative | 1045321 - 1047138 | 69011.7 |
| arac family transcriptional regulator | E1J03_04550 | Not Available | Positive | 1047470 - 1047937 | 18149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

