Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_04405 | Not Available | Negative | 1013102 - 1014091 | 37692.0 |
| lipoyl synthase | E1J03_04410 | Not Available | Negative | 1014149 - 1015003 | 31713.2 |
| s9 family peptidase | E1J03_04415 | Not Available | Negative | 1015101 - 1017302 | 83411.0 |
| tigr01212 family radical sam protein | E1J03_04420 | Not Available | Positive | 1017389 - 1018315 | 35431.8 |
| fpra family a-type flavoprotein | E1J03_04425 | Not Available | Positive | 1018331 - 1019518 | 44722.9 |
| mechanosensitive ion channel | E1J03_04430 | Not Available | Negative | 1019614 - 1020447 | 30693.8 |
| threonylcarbamoyl-amp synthase | E1J03_04435 | Not Available | Negative | 1020496 - 1021110 | 23133.3 |
| tetratricopeptide repeat protein | E1J03_04440 | Not Available | Negative | 1021117 - 1023117 | 76942.2 |
| hypothetical protein | E1J03_04445 | Not Available | Positive | 1023455 - 1023655 | 8017.96 |
| spfh domain-containing protein | E1J03_04450 | Not Available | Positive | 1023684 - 1024634 | 35363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

