Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf255 domain-containing protein | E1J03_04350 | Not Available | Negative | 997485 - 998651 | 44514.2 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_04355 | Not Available | Negative | 998670 - 1000160 | 55729.7 |
| susc/raga family tonb-linked outer membrane protein | E1J03_04360 | Not Available | Negative | 1000181 - 1003498 | 122463.0 |
| duf4974 domain-containing protein | E1J03_04365 | Not Available | Negative | 1003554 - 1004714 | 43986.5 |
| glycosyl hydrolase 43 family protein | E1J03_04375 | Not Available | Negative | 1005465 - 1007129 | 61579.9 |
| duf4861 domain-containing protein | E1J03_04380 | Not Available | Negative | 1007143 - 1008357 | 45665.1 |
| glycoside hydrolase family 28 protein | E1J03_04385 | Not Available | Negative | 1008496 - 1010115 | 59156.8 |
| enoyl-acp reductase | E1J03_04390 | Not Available | Positive | 1010492 - 1011349 | 31326.5 |
| gliding motility lipoprotein gldb | E1J03_04395 | Not Available | Positive | 1011357 - 1012358 | 38857.2 |
| sam-dependent methyltransferase | E1J03_04400 | Not Available | Positive | 1012382 - 1013086 | 26041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

