Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s46 family peptidase | E1J03_00030 | Not Available | Positive | 5660 - 7786 | 80088.8 |
| dead/deah box helicase | E1J03_00035 | Not Available | Negative | 8077 - 9951 | 70681.2 |
| hypothetical protein | E1J03_00040 | Not Available | Positive | 10190 - 10624 | 15684.2 |
| tonb-dependent receptor | E1J03_00045 | Not Available | Positive | 10698 - 12929 | 83968.9 |
| cation transporter | E1J03_00050 | Not Available | Positive | 12958 - 13323 | 13567.4 |
| transcriptional regulator | E1J03_00055 | Not Available | Negative | 13623 - 13835 | 7848.66 |
| hypothetical protein | E1J03_00060 | Not Available | Negative | 13839 - 14096 | 10025.2 |
| duf2975 domain-containing protein | E1J03_00065 | Not Available | Negative | 14109 - 14744 | 23716.2 |
| duf2975 domain-containing protein | E1J03_00070 | Not Available | Negative | 14757 - 15404 | 23549.2 |
| cpbp family intramembrane metalloprotease | E1J03_00075 | Not Available | Negative | 15420 - 16247 | 30649.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

