Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | E1J03_04295 | Not Available | Negative | 986531 - 987457 | 33097.5 |
| atp-binding protein | E1J03_04300 | Not Available | Positive | 987540 - 988361 | 31124.6 |
| duf4435 domain-containing protein | E1J03_04305 | Not Available | Positive | 988383 - 989378 | 39234.6 |
| 6-phosphofructokinase | E1J03_04315 | Not Available | Positive | 990082 - 991062 | 35283.2 |
| had family hydrolase | E1J03_04320 | Not Available | Negative | 991072 - 991725 | 24337.2 |
| nitroreductase | E1J03_04325 | Not Available | Positive | 991788 - 992288 | 18979.8 |
| oxaloacetate decarboxylase | E1J03_04330 | Not Available | Positive | 992557 - 992808 | 8695.18 |
| oxaloacetate decarboxylase | E1J03_04335 | Not Available | Positive | 992839 - 994701 | 68972.7 |
| sodium ion-translocating decarboxylase subunit beta | E1J03_04340 | Not Available | Positive | 994701 - 995936 | 44269.9 |
| tlpa family protein disulfide reductase | E1J03_04345 | Not Available | Negative | 996134 - 997483 | 50488.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

