Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | E1J03_04185 | Not Available | Positive | 963798 - 964262 | 17829.9 |
| gnat family n-acetyltransferase | E1J03_04195 | Not Available | Negative | 964460 - 964996 | 21243.6 |
| peptidase m64 | E1J03_04200 | Not Available | Negative | 965030 - 966415 | 52325.8 |
| asnc family transcriptional regulator | E1J03_04205 | Not Available | Positive | 966444 - 966920 | 17818.5 |
| dihydrofolate reductase | E1J03_04210 | Not Available | Negative | 966924 - 967418 | 18864.7 |
| thymidylate synthase | E1J03_04215 | Not Available | Negative | 967502 - 968296 | 30508.4 |
| duf5056 domain-containing protein | E1J03_04220 | Not Available | Negative | 968378 - 968707 | 12577.5 |
| sigma-70 family rna polymerase sigma factor | E1J03_04225 | Not Available | Negative | 968691 - 969239 | 21091.3 |
| rrna cytosine-c5-methyltransferase | E1J03_04235 | Not Available | Positive | 970080 - 971507 | 53443.2 |
| dna topoisomerase iii | E1J03_04240 | Not Available | Negative | 971645 - 973786 | 79801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

