Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-histidine dipeptidase | E1J03_04080 | Not Available | Positive | 943186 - 944646 | 53303.7 |
| nucleoside deaminase | E1J03_04085 | Not Available | Negative | 944712 - 945179 | 16993.3 |
| hypothetical protein | E1J03_04090 | Not Available | Positive | 945242 - 945553 | 11413.2 |
| hypothetical protein | E1J03_04095 | Not Available | Negative | 945711 - 945935 | 8341.96 |
| transcriptional regulator | E1J03_04100 | Not Available | Positive | 946093 - 946308 | 7808.59 |
| phosphatidylinositol kinase | E1J03_04105 | Not Available | Positive | 946305 - 946640 | 12578.9 |
| type ii toxin-antitoxin system hipa family toxin | E1J03_04110 | Not Available | Positive | 946640 - 947578 | 35884.8 |
| alpha-2-macroglobulin | E1J03_04115 | Not Available | Positive | 947691 - 953372 | 213519.0 |
| hypothetical protein | E1J03_04120 | Not Available | Negative | 953428 - 953865 | 17241.1 |
| duf1573 domain-containing protein | E1J03_04125 | Not Available | Positive | 953996 - 955072 | 39276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

