Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | E1J03_04025 | Not Available | Positive | 931015 - 931788 | 28374.8 |
| hypothetical protein | E1J03_04035 | Not Available | Positive | 932978 - 933712 | 27440.8 |
| phosphatidate cytidylyltransferase | E1J03_04040 | Not Available | Negative | 933704 - 934543 | 30888.4 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | E1J03_04045 | Not Available | Negative | 934695 - 936701 | 74668.3 |
| ribosome silencing factor | E1J03_04050 | Not Available | Negative | 936719 - 937078 | 13423.9 |
| Trna-gln | Not Available | Not Available | Positive | 937398 - 937468 | Not Available |
| duf349 domain-containing protein | E1J03_04060 | Not Available | Negative | 937835 - 939610 | 68912.5 |
| magnesium transporter | E1J03_04065 | Not Available | Negative | 939872 - 941212 | 49694.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E1J03_04070 | Not Available | Negative | 941244 - 942086 | 31917.9 |
| flippase-like domain-containing protein | E1J03_04075 | Not Available | Positive | 942185 - 943189 | 37365.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

