Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3822 family protein | E1J03_03970 | Not Available | Negative | 917133 - 917951 | 32243.5 |
| hypothetical protein | E1J03_03975 | Not Available | Negative | 917954 - 918640 | 25462.8 |
| duf2075 domain-containing protein | E1J03_03980 | Not Available | Positive | 918737 - 920155 | 53903.6 |
| alanine--trna ligase | E1J03_03985 | Not Available | Negative | 920479 - 923097 | 97418.7 |
| m23 family metallopeptidase | E1J03_03990 | Not Available | Positive | 923235 - 924203 | 36161.5 |
| merr family transcriptional regulator | E1J03_03995 | Not Available | Positive | 924237 - 924584 | 13712.9 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | E1J03_04000 | Not Available | Negative | 924675 - 926945 | 86307.9 |
| lysm peptidoglycan-binding domain-containing protein | E1J03_04005 | Not Available | Negative | 927047 - 928309 | 47803.4 |
| hypothetical protein | E1J03_04010 | Not Available | Negative | 928314 - 929021 | 26863.4 |
| para family protein | E1J03_04020 | Not Available | Negative | 929990 - 930757 | 27989.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

