Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tatc | E1J03_03785 | Not Available | Negative | 867508 - 868308 | 30520.4 |
| beta-glucosidase | E1J03_03795 | Not Available | Negative | 868716 - 871046 | 86556.7 |
| sialate o-acetylesterase | E1J03_03800 | Not Available | Negative | 871066 - 872493 | 54065.7 |
| n-acyl-d-glucosamine 2-epimerase | E1J03_03805 | Not Available | Negative | 872542 - 873735 | 47101.5 |
| mfs transporter | E1J03_03810 | Not Available | Negative | 873757 - 875127 | 51178.3 |
| glycosidase | E1J03_03815 | Not Available | Negative | 875268 - 876440 | 44101.2 |
| beta-mannosidase | E1J03_03820 | Not Available | Negative | 876466 - 877566 | 41774.4 |
| hypothetical protein | E1J03_03825 | Not Available | Negative | 877570 - 878742 | 42358.1 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03830 | Not Available | Negative | 878788 - 880572 | 66561.6 |
| acetylxylan esterase | E1J03_03840 | Not Available | Negative | 883893 - 885146 | 47166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

