Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage prohead protease | E1J03_10880 | Not Available | Positive | 2478093 - 2478827 | 27863.4 |
| Major capsid protein | E1J03_10885 | Not Available | Positive | 2478824 - 2480137 | 48557.6 |
| hypothetical protein | E1J03_10890 | Not Available | Positive | 2480151 - 2480369 | 8052.8 |
| 1_nc_021799: structural protein | E1J03_10895 | Not Available | Positive | 2480369 - 2480905 | 20468.3 |
| Attr | Not Available | Not Available | Positive | 2483979 - 2483992 | Not Available |
| Attr | Not Available | Not Available | Positive | 2485696 - 2485707 | Not Available |
| site-specific integrase | E1J03_00010 | Not Available | Negative | 566 - 1684 | 43254.9 |
| holliday junction branch migration dna helicase ruvb | E1J03_00015 | Not Available | Positive | 1811 - 2839 | 38049.7 |
| lipopolysaccharide biosynthesis protein | E1J03_00020 | Not Available | Positive | 2843 - 4288 | 54388.9 |
| tigr00341 family protein | E1J03_00025 | Not Available | Positive | 4291 - 5655 | 50791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

