Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | E1J03_03735 | Not Available | Negative | 859619 - 859822 | 7831.69 |
| hypothetical protein | E1J03_03740 | Not Available | Positive | 860177 - 860368 | 7355.02 |
| dna-binding protein | E1J03_03745 | Not Available | Negative | 860451 - 860771 | 12477.9 |
| dna-binding protein | E1J03_03750 | Not Available | Negative | 860764 - 861114 | 13695.3 |
| hypothetical protein | E1J03_03755 | Not Available | Negative | 861321 - 861512 | 7133.74 |
| sigma-70 family rna polymerase sigma factor | E1J03_03760 | Not Available | Positive | 861550 - 862110 | 21964.9 |
| hypothetical protein | E1J03_03765 | Not Available | Positive | 862147 - 862560 | 15625.0 |
| duf3408 domain-containing protein | E1J03_03770 | Not Available | Negative | 862657 - 863145 | 18397.7 |
| sigma-54-dependent fis family transcriptional regulator | E1J03_03775 | Not Available | Negative | 863915 - 865231 | 50003.7 |
| response regulator | E1J03_03780 | Not Available | Negative | 865206 - 867530 | 88562.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

