Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | E1J03_03685 | Not Available | Positive | 847612 - 848841 | 47184.6 |
| site-specific integrase | E1J03_03690 | Not Available | Positive | 848863 - 850065 | 45680.9 |
| hypothetical protein | E1J03_03695 | Not Available | Negative | 850058 - 850288 | 8870.9 |
| cell filamentation protein fic | E1J03_03700 | Not Available | Negative | 850861 - 852003 | 43902.3 |
| hypothetical protein | E1J03_03705 | Not Available | Negative | 852000 - 852770 | 29802.9 |
| giy-yig nuclease family protein | E1J03_03710 | Not Available | Negative | 852780 - 853607 | 31206.9 |
| hypothetical protein | E1J03_03715 | Not Available | Negative | 853610 - 855421 | 70128.1 |
| tir domain-containing protein | E1J03_03720 | Not Available | Negative | 855427 - 856215 | 30448.0 |
| restriction endonuclease subunit s | E1J03_03725 | Not Available | Negative | 856212 - 857585 | 52164.2 |
| restriction endonuclease subunit m | E1J03_03730 | Not Available | Negative | 857600 - 859612 | 77499.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

