Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | E1J03_03575 | Not Available | Negative | 827875 - 828303 | 16216.2 |
| metal abc transporter permease | E1J03_03580 | Not Available | Negative | 828287 - 829138 | 31359.5 |
| phospholipase | E1J03_03585 | Not Available | Negative | 829199 - 829618 | 15904.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E1J03_03590 | Not Available | Negative | 829623 - 830849 | 45934.7 |
| class i fructose-bisphosphate aldolase | E1J03_03595 | Not Available | Negative | 831010 - 832062 | 38058.5 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | E1J03_03600 | Not Available | Negative | 832215 - 832976 | 29124.8 |
| adp-ribosylglycohydrolase | E1J03_03605 | Not Available | Positive | 833139 - 833924 | 29779.6 |
| dna polymerase iv | E1J03_03610 | Not Available | Negative | 833908 - 834999 | 41226.8 |
| cation/h(+) antiporter | E1J03_03615 | Not Available | Positive | 835107 - 837290 | 80717.3 |
| hypothetical protein | E1J03_03620 | Not Available | Negative | 837803 - 839287 | 55460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

