Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_03525 | Not Available | Positive | 818601 - 818834 | 9401.63 |
| nucleoside deaminase | E1J03_03530 | Not Available | Positive | 818836 - 819270 | 15697.1 |
| duf4834 family protein | E1J03_03535 | Not Available | Negative | 819274 - 819570 | 11342.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | E1J03_03540 | Not Available | Negative | 819622 - 820329 | 26116.5 |
| phosphatidylserine decarboxylase family protein | E1J03_03545 | Not Available | Negative | 820341 - 821027 | 25926.1 |
| dna polymerase iii subunit alpha | E1J03_03550 | Not Available | Positive | 821219 - 825016 | 143962.0 |
| thioredoxin | E1J03_03555 | Not Available | Positive | 825058 - 825372 | 11454.8 |
| hypothetical protein | E1J03_03560 | Not Available | Positive | 825407 - 825742 | 12877.8 |
| plasmid pria4b orf-3 family protein | E1J03_03565 | Not Available | Positive | 825920 - 827479 | 60964.2 |
| hypothetical protein | E1J03_03570 | Not Available | Negative | 827593 - 827808 | 8138.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

