Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | E1J03_03470 | Not Available | Negative | 804800 - 805360 | 20738.2 |
| histidine phosphatase family protein | E1J03_03475 | Not Available | Positive | 805887 - 806405 | 19582.7 |
| duf4450 domain-containing protein | E1J03_03480 | Not Available | Negative | 806428 - 809685 | 121283.0 |
| hypothetical protein | E1J03_03485 | Not Available | Negative | 809710 - 811818 | 80038.5 |
| glycoside hydrolase family 88 protein | E1J03_03490 | Not Available | Negative | 811873 - 813111 | 47110.1 |
| ump kinase | E1J03_03495 | Not Available | Negative | 813369 - 814079 | 25575.2 |
| mate family efflux transporter | E1J03_03500 | Not Available | Negative | 814118 - 815443 | 48935.7 |
| biotin--[acetyl-coa-carboxylase] ligase | E1J03_03510 | Not Available | Negative | 817035 - 817802 | 29318.1 |
| mmcq/yjbr family dna-binding protein | E1J03_03515 | Not Available | Negative | 817786 - 818142 | 14020.0 |
| yran family protein | E1J03_03520 | Not Available | Negative | 818160 - 818525 | 14151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

