Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4954 family protein | E1J03_03420 | Not Available | Positive | 787181 - 789166 | 74525.5 |
| coce/nond family hydrolase | E1J03_03425 | Not Available | Negative | 789310 - 791217 | 73917.9 |
| fumarate hydratase | E1J03_03430 | Not Available | Positive | 791357 - 793000 | 60429.6 |
| alpha-n-acetylglucosaminidase | E1J03_03435 | Not Available | Positive | 793102 - 795258 | 82572.3 |
| amino acid permease | E1J03_03440 | Not Available | Negative | 795430 - 797088 | 59811.5 |
| tolc family protein | E1J03_03445 | Not Available | Negative | 797177 - 798496 | 50543.6 |
| efflux rnd transporter permease subunit | E1J03_03450 | Not Available | Negative | 798493 - 801528 | 112028.0 |
| efflux rnd transporter periplasmic adaptor subunit | E1J03_03455 | Not Available | Negative | 801547 - 802623 | 39658.0 |
| m20/m25/m40 family metallo-hydrolase | E1J03_03460 | Not Available | Negative | 802710 - 803732 | 38392.9 |
| ribosome small subunit-dependent gtpase a | E1J03_03465 | Not Available | Negative | 803746 - 804678 | 35100.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

