Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03360 | Not Available | Negative | 762668 - 764209 | 57972.3 |
| tonb-dependent receptor | E1J03_03365 | Not Available | Negative | 764312 - 767158 | 105389.0 |
| hypothetical protein | E1J03_03370 | Not Available | Negative | 768149 - 768937 | 28632.6 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03375 | Not Available | Negative | 768962 - 770503 | 57156.1 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03385 | Not Available | Negative | 773716 - 775212 | 56718.5 |
| tonb-dependent receptor | E1J03_03390 | Not Available | Negative | 775225 - 778116 | 106969.0 |
| site-specific integrase | E1J03_03400 | Not Available | Negative | 779495 - 780655 | 44985.7 |
| tonb-dependent receptor | E1J03_03405 | Not Available | Positive | 781039 - 784212 | 117063.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03410 | Not Available | Positive | 784236 - 785822 | 58752.5 |
| gtpase hflx | E1J03_03415 | Not Available | Positive | 785914 - 787167 | 47673.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

