Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_03305 | Not Available | Negative | 751616 - 753130 | 57602.9 |
| dna polymerase iii subunit delta | E1J03_03310 | Not Available | Negative | 753220 - 754344 | 43505.9 |
| methylenetetrahydrofolate reductase | E1J03_03315 | Not Available | Negative | 754372 - 755324 | 34231.3 |
| cardiolipin synthase | E1J03_03320 | Not Available | Negative | 755681 - 756976 | 49643.3 |
| Trna-lys | Not Available | Not Available | Positive | 758049 - 758124 | Not Available |
| ai-2e family transporter | E1J03_03335 | Not Available | Negative | 758216 - 759352 | 42777.2 |
| thymidine kinase | E1J03_03340 | Not Available | Negative | 759363 - 759962 | 22348.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | E1J03_03345 | Not Available | Positive | 760168 - 760842 | 25002.3 |
| hypothetical protein | E1J03_03350 | Not Available | Positive | 760871 - 761719 | 31531.5 |
| noncanonical pyrimidine nucleotidase, yjjg family | E1J03_03355 | Not Available | Positive | 761796 - 762485 | 26986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

