Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_03250 | Not Available | Positive | 736662 - 737396 | 27084.5 |
| s9 family peptidase | E1J03_03255 | Not Available | Positive | 737508 - 739949 | 94355.2 |
| aminoglycoside phosphotransferase family protein | E1J03_03260 | Not Available | Negative | 740028 - 741110 | 41579.0 |
| inorganic phosphate transporter | E1J03_03265 | Not Available | Negative | 741216 - 743468 | 83798.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | E1J03_03270 | Not Available | Positive | 743748 - 745271 | 56208.1 |
| rod shape-determining protein | E1J03_03275 | Not Available | Positive | 745383 - 746405 | 36937.0 |
| rod shape-determining protein mrec | E1J03_03280 | Not Available | Positive | 746511 - 747359 | 31435.5 |
| rod shape-determining protein mred | E1J03_03285 | Not Available | Positive | 747368 - 747868 | 18960.0 |
| penicillin-binding protein 2 | E1J03_03290 | Not Available | Positive | 747868 - 749718 | 69059.3 |
| gliding motility lipoprotein gldh | E1J03_03300 | Not Available | Negative | 751156 - 751653 | 18852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

