Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E1J03_03090 | Not Available | Negative | 673258 - 674214 | 35996.2 |
| pts sugar transporter subunit iic | E1J03_03095 | Not Available | Negative | 674233 - 675624 | 49960.0 |
| glycoside hydrolase family 88 protein | E1J03_03100 | Not Available | Positive | 675914 - 677143 | 47092.3 |
| pectin esterase | E1J03_03105 | Not Available | Positive | 677158 - 678108 | 35858.5 |
| tonb-dependent receptor | E1J03_03110 | Not Available | Positive | 678327 - 681599 | 118856.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03115 | Not Available | Positive | 681632 - 683797 | 79613.6 |
| helix-turn-helix domain-containing protein | E1J03_03120 | Not Available | Positive | 684009 - 686480 | 94320.0 |
| hypothetical protein | E1J03_03130 | Not Available | Positive | 688271 - 688567 | 10664.0 |
| beta-glucosidase | E1J03_03135 | Not Available | Positive | 688596 - 690905 | 85543.9 |
| alpha/beta fold hydrolase | E1J03_03140 | Not Available | Positive | 690902 - 692185 | 47469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

