Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | E1J03_03040 | Not Available | Positive | 650931 - 652520 | 60467.0 |
| glycosyl hydrolase family 2 | E1J03_03045 | Not Available | Positive | 652711 - 656037 | 123911.0 |
| glycoside hydrolase | E1J03_03050 | Not Available | Positive | 656050 - 658599 | 95914.0 |
| response regulator | E1J03_03055 | Not Available | Positive | 658725 - 662978 | 162222.0 |
| aldehyde dehydrogenase | E1J03_03060 | Not Available | Positive | 663170 - 664606 | 52475.2 |
| arabinosidase | E1J03_03065 | Not Available | Positive | 664792 - 665796 | 38087.6 |
| duf4038 domain-containing protein | E1J03_03070 | Not Available | Positive | 665865 - 667328 | 55529.9 |
| hypothetical protein | E1J03_03075 | Not Available | Positive | 667424 - 668164 | 28074.7 |
| dna helicase | E1J03_03080 | Not Available | Positive | 668186 - 671512 | 128673.0 |
| mfs transporter | E1J03_03085 | Not Available | Negative | 671565 - 673040 | 54264.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

