Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | E1J03_02980 | Not Available | Positive | 626839 - 629316 | 93564.8 |
| glycosyl hydrolase family 43 | E1J03_02985 | Not Available | Positive | 629428 - 630750 | 49760.6 |
| glycoside hydrolase family 28 protein | E1J03_02990 | Not Available | Positive | 630803 - 632179 | 52383.0 |
| glycoside hydrolase family 43 protein | E1J03_02995 | Not Available | Positive | 632232 - 633824 | 59318.9 |
| helix-turn-helix domain-containing protein | E1J03_03005 | Not Available | Positive | 634378 - 637164 | 106355.0 |
| duf4982 domain-containing protein | E1J03_03015 | Not Available | Positive | 639055 - 642033 | 113542.0 |
| glucuronyl hydrolase | E1J03_03020 | Not Available | Positive | 642089 - 643279 | 45550.8 |
| duf2264 domain-containing protein | E1J03_03025 | Not Available | Positive | 643269 - 644498 | 46699.5 |
| glycoside hydrolase family 2 | E1J03_03030 | Not Available | Positive | 644793 - 647660 | 108329.0 |
| tonb-dependent receptor | E1J03_03035 | Not Available | Positive | 647854 - 650883 | 111791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

