Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | E1J03_02930 | Not Available | Negative | 610718 - 614236 | 130481.0 |
| duf4974 domain-containing protein | E1J03_02935 | Not Available | Negative | 614392 - 615336 | 35874.2 |
| rna polymerase sigma-70 factor | E1J03_02940 | Not Available | Negative | 615455 - 616042 | 22846.5 |
| duf1573 domain-containing protein | E1J03_02945 | Not Available | Negative | 616137 - 616394 | 9650.44 |
| helicase | E1J03_02950 | Not Available | Negative | 616531 - 617892 | 52127.3 |
| dna-binding protein | E1J03_02955 | Not Available | Positive | 618221 - 618901 | 25999.2 |
| rna polymerase sigma-70 factor | E1J03_02960 | Not Available | Negative | 619094 - 619660 | 22215.9 |
| duf4974 domain-containing protein | E1J03_02965 | Not Available | Positive | 619805 - 620818 | 38667.3 |
| susc/raga family tonb-linked outer membrane protein | E1J03_02970 | Not Available | Positive | 621249 - 624560 | 122551.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_02975 | Not Available | Positive | 624574 - 626625 | 77975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

