Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | E1J03_02875 | Not Available | Negative | 589848 - 591341 | 55533.0 |
| hypothetical protein | E1J03_02880 | Not Available | Positive | 592818 - 593513 | 26789.0 |
| duf229 domain-containing protein | E1J03_02885 | Not Available | Negative | 593717 - 595114 | 53379.6 |
| susc/raga family tonb-linked outer membrane protein | E1J03_02895 | Not Available | Negative | 596972 - 600379 | 127378.0 |
| fecr family protein | E1J03_02900 | Not Available | Negative | 600549 - 601523 | 37090.5 |
| rna polymerase sigma-70 factor | E1J03_02905 | Not Available | Negative | 601579 - 602160 | 23412.5 |
| glycoside hydrolase family 43 protein | E1J03_02910 | Not Available | Negative | 602327 - 603976 | 61746.1 |
| glycosyl hydrolase family 43 | E1J03_02915 | Not Available | Negative | 604092 - 605414 | 49776.6 |
| glycoside hydrolase family 2 | E1J03_02920 | Not Available | Negative | 605522 - 608575 | 117523.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_02925 | Not Available | Negative | 608655 - 610706 | 78213.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

