Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | E1J03_02645 | Not Available | Negative | 535266 - 536573 | 49200.5 |
| hybrid sensor histidine kinase/response regulator | E1J03_02650 | Not Available | Negative | 536554 - 538899 | 88814.1 |
| hypothetical protein | E1J03_02655 | Not Available | Negative | 539079 - 539672 | 22083.8 |
| duf2589 domain-containing protein | E1J03_02660 | Not Available | Negative | 539677 - 540381 | 25733.3 |
| duf2589 domain-containing protein | E1J03_02665 | Not Available | Negative | 540403 - 540900 | 18562.1 |
| fimbrillin family protein | E1J03_02670 | Not Available | Negative | 541127 - 542839 | 59501.5 |
| fimbrillin family protein | E1J03_02675 | Not Available | Negative | 542852 - 544423 | 56179.6 |
| hypothetical protein | E1J03_02685 | Not Available | Negative | 545366 - 546253 | 31347.9 |
| duf3575 domain-containing protein | E1J03_02690 | Not Available | Negative | 546270 - 547328 | 40004.5 |
| arac family transcriptional regulator | E1J03_02695 | Not Available | Negative | 547607 - 548689 | 42303.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

