Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | E1J03_02525 | Not Available | Negative | 514667 - 516091 | 51394.7 |
| duf3989 domain-containing protein | E1J03_02530 | Not Available | Negative | 516072 - 516377 | 11686.4 |
| conjugative transposon protein traj | E1J03_02540 | Not Available | Negative | 517037 - 518041 | 37121.8 |
| duf4141 domain-containing protein | E1J03_02545 | Not Available | Negative | 518045 - 518674 | 24171.3 |
| duf3876 domain-containing protein | E1J03_02550 | Not Available | Negative | 518705 - 519088 | 14474.5 |
| group ii intron reverse transcriptase/maturase | E1J03_02560 | Not Available | Negative | 521503 - 523179 | 65374.5 |
| duf3875 domain-containing protein | E1J03_02565 | Not Available | Negative | 523786 - 524031 | 9231.19 |
| duf4133 domain-containing protein | E1J03_02570 | Not Available | Negative | 524028 - 524360 | 12600.7 |
| duf4134 domain-containing protein | E1J03_02575 | Not Available | Negative | 524371 - 524682 | 10705.1 |
| conjugal transfer protein trad | E1J03_02580 | Not Available | Negative | 524884 - 525624 | 27964.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

