Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase | E1J03_02415 | Not Available | Positive | 498293 - 499264 | 36202.5 |
| lactonase family protein | E1J03_02420 | Not Available | Negative | 499355 - 500521 | 42738.1 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 500662 - 501056 | Not Available |
| alpha-l-fucosidase | E1J03_02430 | Not Available | Negative | 501235 - 502560 | 50401.0 |
| gtp-binding protein | E1J03_02435 | Not Available | Positive | 502710 - 503933 | 46659.1 |
| molybdenum abc transporter atp-binding protein | E1J03_02450 | Not Available | Positive | 506611 - 506946 | 12959.5 |
| hypothetical protein | E1J03_02455 | Not Available | Positive | 506954 - 507169 | 8116.46 |
| hypothetical protein | E1J03_02460 | Not Available | Positive | 507181 - 507402 | 8927.74 |
| pcfk-like protein | E1J03_02465 | Not Available | Positive | 507426 - 507845 | 16155.0 |
| pcfj-like protein | E1J03_02470 | Not Available | Positive | 507842 - 509107 | 48806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

