Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | E1J03_02310 | Not Available | Negative | 476278 - 477813 | 56149.4 |
| hypoxanthine phosphoribosyltransferase | E1J03_02315 | Not Available | Positive | 477933 - 478469 | 19963.3 |
| adenylate kinase | E1J03_02320 | Not Available | Positive | 478510 - 479079 | 20915.2 |
| gtpase obge | E1J03_02325 | Not Available | Positive | 479195 - 480379 | 44168.2 |
| peptidoglycan editing factor pgef | E1J03_02330 | Not Available | Positive | 480376 - 481158 | 28928.4 |
| hypothetical protein | E1J03_02335 | Not Available | Positive | 481198 - 481857 | 24444.4 |
| m23 family metallopeptidase | E1J03_02340 | Not Available | Positive | 481867 - 482490 | 22874.6 |
| hypothetical protein | E1J03_02345 | Not Available | Positive | 482495 - 482686 | 7000.6 |
| porin family protein | E1J03_02350 | Not Available | Positive | 482890 - 483426 | 19609.2 |
| port family protein | E1J03_02355 | Not Available | Positive | 483630 - 484235 | 21307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

