Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | E1J03_02260 | Not Available | Negative | 463269 - 463523 | 9656.59 |
| class ii fructose-1,6-bisphosphate aldolase | E1J03_02265 | Not Available | Positive | 463850 - 464854 | 36444.6 |
| arac family transcriptional regulator | E1J03_02270 | Not Available | Negative | 464917 - 465750 | 32279.8 |
| efflux rnd transporter periplasmic adaptor subunit | E1J03_02275 | Not Available | Positive | 465898 - 467013 | 40111.3 |
| efflux rnd transporter permease subunit | E1J03_02280 | Not Available | Positive | 467021 - 470236 | 117255.0 |
| tolc family protein | E1J03_02285 | Not Available | Positive | 470233 - 471606 | 50222.8 |
| duf4934 domain-containing protein | E1J03_02290 | Not Available | Negative | 471687 - 472919 | 45905.9 |
| duf3332 domain-containing protein | E1J03_02295 | Not Available | Negative | 473000 - 473551 | 19939.6 |
| mfs transporter | E1J03_02300 | Not Available | Positive | 473725 - 475113 | 51181.4 |
| duf4831 family protein | E1J03_02305 | Not Available | Negative | 475192 - 476241 | 38570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

