Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | E1J03_02210 | Not Available | Positive | 449220 - 450026 | 31248.6 |
| dna-binding protein | E1J03_02215 | Not Available | Negative | 450065 - 450676 | 23008.6 |
| tonb-dependent receptor | E1J03_02220 | Not Available | Positive | 451345 - 453663 | 87027.7 |
| duf4980 domain-containing protein | E1J03_02225 | Not Available | Positive | 453698 - 455581 | 71016.3 |
| mfs transporter | E1J03_02230 | Not Available | Positive | 455632 - 456792 | 41691.7 |
| carbohydrate kinase | E1J03_02235 | Not Available | Positive | 456795 - 457691 | 32753.4 |
| response regulator | E1J03_02240 | Not Available | Positive | 457907 - 460633 | 103033.0 |
| amino acid-binding protein | E1J03_02245 | Not Available | Negative | 460687 - 461115 | 15671.1 |
| phenylacetate--coa ligase | E1J03_02250 | Not Available | Negative | 461127 - 462425 | 49200.5 |
| duf3256 family protein | E1J03_02255 | Not Available | Positive | 462539 - 463180 | 24321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

