Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | E1J03_02160 | Not Available | Positive | 437974 - 439317 | 50880.3 |
| dde transposase | E1J03_02165 | Not Available | Negative | 439480 - 440415 | 36314.6 |
| transposase | E1J03_02170 | Not Available | Negative | 440444 - 440827 | 14685.6 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | E1J03_02175 | Not Available | Negative | 441340 - 441798 | 17378.7 |
| anaerobic ribonucleoside triphosphate reductase | E1J03_02180 | Not Available | Negative | 441804 - 444080 | 86255.1 |
| hemolysin iii | E1J03_02185 | Not Available | Negative | 444375 - 445010 | 23692.3 |
| hd domain-containing protein | E1J03_02190 | Not Available | Negative | 445015 - 446517 | 57494.8 |
| hypothetical protein | E1J03_02195 | Not Available | Positive | 446535 - 447359 | 30836.0 |
| holliday junction branch migration protein ruva | E1J03_02200 | Not Available | Negative | 447445 - 448038 | 21171.8 |
| diaminopimelate dehydrogenase | E1J03_02205 | Not Available | Positive | 448214 - 449113 | 32319.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

