Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4494 domain-containing protein | E1J03_10735 | Not Available | Positive | 2460038 - 2460508 | 17902.1 |
| Nuclease | E1J03_10740 | Not Available | Positive | 2460839 - 2461192 | 13778.7 |
| Attl | Not Available | Not Available | Positive | 2461307 - 2461320 | Not Available |
| hypothetical protein | E1J03_10745 | Not Available | Positive | 2461609 - 2461800 | 7418.82 |
| Dna replication protein | E1J03_10750 | Not Available | Positive | 2461971 - 2462300 | 13036.0 |
| Hnh endonuclease | E1J03_10755 | Not Available | Positive | 2462409 - 2462648 | 9202.9 |
| Recombinase | E1J03_10760 | Not Available | Positive | 2462635 - 2463753 | 43069.8 |
| Putative dna polymerase iii delta prime subunit | E1J03_10765 | Not Available | Positive | 2463770 - 2465116 | 50390.4 |
| hypothetical protein | E1J03_10770 | Not Available | Positive | 2465305 - 2465487 | 7364.88 |
| hypothetical protein | E1J03_10775 | Not Available | Positive | 2465568 - 2465954 | 14777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

