Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | E1J03_02110 | Not Available | Negative | 430344 - 430916 | 22211.8 |
| hypothetical protein | E1J03_02115 | Not Available | Negative | 430898 - 431080 | 6793.87 |
| guanylate kinase | E1J03_02120 | Not Available | Negative | 431085 - 431654 | 21311.5 |
| yicc family protein | E1J03_02125 | Not Available | Negative | 431701 - 432576 | 33784.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | E1J03_02130 | Not Available | Positive | 432672 - 433361 | 25281.7 |
| duf4290 domain-containing protein | E1J03_02135 | Not Available | Positive | 433406 - 434032 | 24871.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | E1J03_02140 | Not Available | Positive | 434051 - 435355 | 47549.0 |
| ribosome maturation factor rimm | E1J03_02145 | Not Available | Positive | 435367 - 435885 | 19761.6 |
| m23 family metallopeptidase | E1J03_02150 | Not Available | Positive | 435904 - 436761 | 32093.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | E1J03_02155 | Not Available | Positive | 436769 - 437917 | 42384.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

