Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor | E1J03_02075 | Not Available | Negative | 425549 - 425887 | 12778.4 |
| redox-sensing transcriptional repressor rex | E1J03_02080 | Not Available | Positive | 426005 - 426655 | 24309.7 |
| faa hydrolase family protein | E1J03_02085 | Not Available | Positive | 426660 - 427277 | 23317.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 426912 - 427022 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 427101 - 429992 | Not Available |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | E1J03_02090 | Not Available | Positive | 427274 - 427756 | 17461.2 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | E1J03_02095 | Not Available | Negative | 427760 - 428650 | 32706.8 |
| metallophosphoesterase | E1J03_02100 | Not Available | Positive | 428724 - 429563 | 31418.6 |
| duf3836 domain-containing protein | E1J03_02105 | Not Available | Positive | 429791 - 430261 | 18255.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 430411 - 431950 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

