Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | E1J03_02025 | Not Available | Positive | 416069 - 417415 | 50974.1 |
| pseudouridine synthase | E1J03_02030 | Not Available | Positive | 417491 - 418948 | 55785.4 |
| asparagine--trna ligase | E1J03_02035 | Not Available | Positive | 418971 - 420374 | 53423.0 |
| duf4488 domain-containing protein | E1J03_02040 | Not Available | Positive | 420535 - 421029 | 18658.9 |
| zeta toxin | E1J03_02045 | Not Available | Positive | 421431 - 422006 | 21455.8 |
| hypothetical protein | E1J03_02050 | Not Available | Positive | 421996 - 422241 | 9071.72 |
| 50s ribosomal protein l13 | E1J03_02055 | Not Available | Positive | 422543 - 423004 | 17129.7 |
| 30s ribosomal protein s9 | E1J03_02060 | Not Available | Positive | 423011 - 423397 | 14527.7 |
| 30s ribosomal protein s2 | E1J03_02065 | Not Available | Positive | 423530 - 424369 | 30550.9 |
| elongation factor ts | E1J03_02070 | Not Available | Positive | 424502 - 425491 | 35546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

