Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | E1J03_01975 | Not Available | Positive | 406086 - 406691 | 22782.7 |
| biopolymer transporter exbd | E1J03_01980 | Not Available | Positive | 406704 - 407354 | 24360.2 |
| energy transducer tonb | E1J03_01985 | Not Available | Positive | 407384 - 408196 | 30321.8 |
| phosphate abc transporter substrate-binding protein | E1J03_01990 | Not Available | Positive | 408206 - 409153 | 34642.9 |
| tetratricopeptide repeat protein | E1J03_01995 | Not Available | Positive | 409170 - 410585 | 53822.6 |
| abc transporter atp-binding protein | E1J03_02000 | Not Available | Positive | 410771 - 411613 | 31623.4 |
| hypothetical protein | E1J03_02005 | Not Available | Positive | 411626 - 412516 | 34269.5 |
| gntr family transcriptional regulator | E1J03_02010 | Not Available | Positive | 412513 - 412878 | 14203.0 |
| m28 family peptidase | E1J03_02015 | Not Available | Negative | 412970 - 414463 | 54983.2 |
| mate family efflux transporter | E1J03_02020 | Not Available | Positive | 414626 - 415975 | 49783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

