Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | E1J03_01915 | Not Available | Negative | 392277 - 394058 | 65769.7 |
| nitroreductase family protein | E1J03_01920 | Not Available | Positive | 394193 - 394798 | 23024.5 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | E1J03_01925 | Not Available | Positive | 394871 - 397711 | 105161.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 399121 - 400660 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 400790 - 400866 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 400879 - 400952 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 401079 - 403970 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 404049 - 404159 | Not Available |
| hypothetical protein | E1J03_01965 | Not Available | Positive | 404729 - 405133 | 15147.6 |
| mota/tolq/exbb proton channel family protein | E1J03_01970 | Not Available | Positive | 405242 - 406057 | 28979.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

