Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | E1J03_01760 | Not Available | Positive | 369398 - 370705 | 47906.3 |
| conjugative transposon protein tran | E1J03_01765 | Not Available | Positive | 370756 - 371670 | 34913.4 |
| conjugal transfer protein trao | E1J03_01770 | Not Available | Positive | 371667 - 372254 | 21698.0 |
| duf3872 domain-containing protein | E1J03_01775 | Not Available | Positive | 372275 - 372733 | 17552.6 |
| glycoside hydrolase | E1J03_01780 | Not Available | Positive | 372730 - 373209 | 18512.9 |
| hypothetical protein | E1J03_01785 | Not Available | Positive | 373339 - 374151 | 31255.8 |
| tigr02594 family protein | E1J03_01790 | Not Available | Positive | 374584 - 375042 | 17068.3 |
| hypothetical protein | E1J03_01795 | Not Available | Positive | 375054 - 375530 | 18450.9 |
| hypothetical protein | E1J03_01800 | Not Available | Positive | 375745 - 375933 | 7294.22 |
| hypothetical protein | E1J03_01805 | Not Available | Negative | 376091 - 376945 | 33494.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

