Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | E1J03_01710 | Not Available | Positive | 361875 - 362324 | 17126.4 |
| duf4122 domain-containing protein | E1J03_01715 | Not Available | Positive | 362312 - 362977 | 25202.0 |
| duf4134 domain-containing protein | E1J03_01720 | Not Available | Positive | 363242 - 363538 | 10417.8 |
| duf4133 domain-containing protein | E1J03_01725 | Not Available | Positive | 363544 - 363873 | 12720.0 |
| trag family conjugative transposon atpase | E1J03_01730 | Not Available | Positive | 363870 - 366395 | 97207.9 |
| duf3876 domain-containing protein | E1J03_01735 | Not Available | Positive | 366392 - 366760 | 13796.7 |
| duf4141 domain-containing protein | E1J03_01740 | Not Available | Positive | 366757 - 367386 | 23991.7 |
| conjugative transposon protein traj | E1J03_01745 | Not Available | Positive | 367389 - 368402 | 37409.8 |
| conjugative transposon protein trak | E1J03_01750 | Not Available | Positive | 368525 - 369148 | 23932.5 |
| hypothetical protein | E1J03_01755 | Not Available | Positive | 369145 - 369447 | 11174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

