Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin fold metalloprotein, wbuc family | E1J03_01605 | Not Available | Positive | 341193 - 341591 | 14923.0 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | E1J03_01610 | Not Available | Positive | 341598 - 342779 | 44208.0 |
| glycosyltransferase | E1J03_01615 | Not Available | Positive | 342811 - 343992 | 45401.1 |
| acyltransferase | E1J03_01620 | Not Available | Positive | 344062 - 344400 | 12059.8 |
| serine acetyltransferase | E1J03_01625 | Not Available | Positive | 344405 - 344902 | 18250.5 |
| delta-aminolevulinic acid dehydratase | E1J03_01635 | Not Available | Positive | 345378 - 346571 | 45823.0 |
| glycosyltransferase | E1J03_01640 | Not Available | Positive | 346584 - 347282 | 27114.1 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | E1J03_01645 | Not Available | Positive | 347294 - 348454 | 43449.7 |
| hypothetical protein | E1J03_01650 | Not Available | Negative | 348545 - 348811 | 10244.5 |
| hypothetical protein | E1J03_01655 | Not Available | Positive | 349350 - 349658 | 11954.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

