Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upxy family transcription antiterminator | E1J03_01545 | Not Available | Positive | 327293 - 327841 | 21294.2 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | E1J03_01550 | Not Available | Positive | 327866 - 328972 | 41886.2 |
| polysaccharide export protein | E1J03_01555 | Not Available | Positive | 328999 - 329793 | 29399.8 |
| polysaccharide biosynthesis tyrosine autokinase | E1J03_01560 | Not Available | Positive | 329835 - 332201 | 88852.3 |
| capsular biosynthesis protein | E1J03_01565 | Not Available | Positive | 332261 - 332965 | 27331.6 |
| udp-n-acetyl-d-mannosamine dehydrogenase | E1J03_01570 | Not Available | Positive | 333046 - 334251 | 44688.4 |
| hypothetical protein | E1J03_01575 | Not Available | Positive | 334296 - 334547 | 10187.7 |
| hypothetical protein | E1J03_01580 | Not Available | Positive | 335070 - 336413 | 50712.3 |
| nad-dependent epimerase/dehydratase family protein | E1J03_01595 | Not Available | Positive | 338784 - 339857 | 40101.4 |
| capsular polysaccharide biosynthesis protein capf | E1J03_01600 | Not Available | Positive | 340032 - 341186 | 43067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

