Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_01445 | Not Available | Positive | 313246 - 313620 | 14661.8 |
| dna-binding protein | E1J03_01450 | Not Available | Negative | 313798 - 314097 | 11807.5 |
| dna-binding protein | E1J03_01455 | Not Available | Negative | 314105 - 314389 | 10989.5 |
| helix-turn-helix domain-containing protein | E1J03_01460 | Not Available | Positive | 314859 - 315152 | 11695.3 |
| nyn domain-containing protein | E1J03_01465 | Not Available | Positive | 315209 - 315913 | 26257.6 |
| prtrc system thif family protein | E1J03_01470 | Not Available | Negative | 315997 - 316788 | 29541.6 |
| prtrc system protein b | E1J03_01475 | Not Available | Negative | 316785 - 317486 | 26695.9 |
| hypothetical protein | E1J03_01480 | Not Available | Negative | 317497 - 318606 | 43289.2 |
| prtrc system protein c | E1J03_01485 | Not Available | Negative | 318643 - 318864 | 8402.05 |
| prtrc system protein e | E1J03_01490 | Not Available | Negative | 318887 - 319942 | 39400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

