Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | E1J03_01225 | Not Available | Negative | 274148 - 274504 | 13432.8 |
| site-specific integrase | E1J03_01230 | Not Available | Positive | 274621 - 275850 | 47801.2 |
| site-specific integrase | E1J03_01235 | Not Available | Positive | 275871 - 277088 | 46404.0 |
| dna-binding protein | E1J03_01240 | Not Available | Negative | 277153 - 277446 | 11540.9 |
| dna-binding protein | E1J03_01245 | Not Available | Negative | 277459 - 277662 | 8072.87 |
| hypothetical protein | E1J03_01250 | Not Available | Negative | 277796 - 278017 | 8315.08 |
| hypothetical protein | E1J03_01255 | Not Available | Negative | 278054 - 278287 | 8983.52 |
| amidoligase enzyme | E1J03_01260 | Not Available | Negative | 278284 - 279213 | 35542.8 |
| para family protein | E1J03_01265 | Not Available | Negative | 279334 - 280044 | 26893.6 |
| duf3408 domain-containing protein | E1J03_01270 | Not Available | Negative | 280137 - 280475 | 12220.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

