Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cfxa family class a broad-spectrum beta-lactamase | E1J03_05605 | Not Available | Positive | 1313706 - 1314671 | 35664.1 |
| mobilization protein | E1J03_05610 | Not Available | Negative | 1314775 - 1316178 | 54384.4 |
| Dna primase | E1J03_05615 | Not Available | Negative | 1316403 - 1317359 | 36652.6 |
| Hypothetical protein | E1J03_05620 | Not Available | Negative | 1317574 - 1318650 | 41122.7 |
| duf3853 family protein | E1J03_05625 | Not Available | Negative | 1318665 - 1318973 | 11311.9 |
| hypothetical protein | E1J03_05630 | Not Available | Negative | 1319197 - 1320234 | 41498.9 |
| duf1016 family protein | E1J03_05635 | Not Available | Negative | 1320240 - 1321538 | 49343.9 |
| 3_nc_021792: site specific recombinase, tyrosine | E1J03_05640 | Not Available | Negative | 1321606 - 1322889 | 50443.3 |
| Attr | Not Available | Not Available | Positive | 1326192 - 1326205 | Not Available |
| Attl | Not Available | Not Available | Positive | 2446830 - 2446841 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

