Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_01075 | Not Available | Positive | 247366 - 247731 | 13699.5 |
| m20/m25/m40 family metallo-hydrolase | E1J03_01080 | Not Available | Negative | 247737 - 248801 | 39022.6 |
| long-chain fatty acid--coa ligase | E1J03_01085 | Not Available | Positive | 249015 - 250820 | 68439.3 |
| peptide chain release factor 2 | E1J03_01090 | Not Available | Positive | 250878 - 251993 | 42535.2 |
| cyth domain-containing protein | E1J03_01095 | Not Available | Positive | 252292 - 252762 | 18287.6 |
| tonb-dependent receptor | E1J03_01100 | Not Available | Positive | 252852 - 255326 | 91711.6 |
| rna polymerase sigma factor | E1J03_01105 | Not Available | Positive | 255495 - 255998 | 19793.6 |
| hypothetical protein | E1J03_01110 | Not Available | Negative | 256079 - 256465 | 14818.5 |
| sodium-dependent transporter | E1J03_01115 | Not Available | Positive | 256561 - 257925 | 49169.4 |
| helix-hairpin-helix domain-containing protein | E1J03_01120 | Not Available | Positive | 257933 - 258835 | 35161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

