Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase | E1J03_01020 | Not Available | Positive | 234079 - 234789 | 26461.0 |
| low molecular weight phosphotyrosine protein phosphatase | E1J03_01025 | Not Available | Positive | 234797 - 235267 | 17933.4 |
| hdig domain-containing protein | E1J03_01030 | Not Available | Negative | 235242 - 237299 | 79094.7 |
| glutamate--trna ligase | E1J03_01035 | Not Available | Positive | 237381 - 238898 | 57935.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | E1J03_01040 | Not Available | Positive | 238911 - 240131 | 46686.5 |
| arac family transcriptional regulator | E1J03_01050 | Not Available | Positive | 241335 - 241823 | 18916.8 |
| hypothetical protein | E1J03_01055 | Not Available | Positive | 241900 - 244728 | 104310.0 |
| hypothetical protein | E1J03_01060 | Not Available | Positive | 244867 - 245523 | 25898.1 |
| nudix domain-containing protein | E1J03_01065 | Not Available | Positive | 245474 - 246364 | 34073.8 |
| nad-dependent epimerase/dehydratase family protein | E1J03_01070 | Not Available | Positive | 246372 - 247214 | 31399.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

